BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004H12SP1|AL425303
(938 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1743 1806 0.0
>3x_Contig1743
Length = 20172
Score = 1806 bits (909), Expect = 0.0
Identities = 931/939 (99%), Gaps = 1/939 (0%)
Strand = Plus / Plus
Query: 1 gatccttcgtgagagaaagtggaactgaagacgca-ttagggtttatgcagaagctgaaa 59
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10383 gatccttcgtgagagcaagtggaactgaagacgcagttagggtttatgcagaagctgaaa 10442
Query: 60 cgacagaaagtgccatcgaattagctacgaaagtaggagaactagtcaaattatttggct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10443 cgacagaaagtgccatcgaattagctacgaaagtaggagaactagtcaaattatttggct 10502
Query: 120 gaaaatagtttccatgtagaatttcggcagaccacgccgttagttgcattgccttataca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10503 gaaaatagtttccatgtagaatttcggcagaccacgccgttagttgcattgccttataca 10562
Query: 180 caattttttgtttttattgcatgctatataatgaaatataattaaaaacagctgacagaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10563 caattttttgtttttattgcatgctatataatgaaatataattaaaaacagctgacagaa 10622
Query: 240 caagaaagactttcgagagcccatcgcatgaacatgcaaataaaaaaatcatagtcagac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10623 caagaaagactttcgagagcccatcgcatgaacatgcaaataaaaaaatcatagtcagac 10682
Query: 300 ttcacgaagatcggtgcgtctacgatggctaagaagaaggataaagagtccaaaaaggct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10683 ttcacgaagatcggtgcgtctacgatggctaagaagaaggataaagagtccaaaaaggct 10742
Query: 360 cgtactgaagccaagaataagaaggcactggaaaaagccgcagtgaaagataaaaagaag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10743 cgtactgaagccaagaataagaaggcactggaaaaagccgcagtgaaagataaaaagaag 10802
Query: 420 gcaaagaagttatctcaagatgaagaagaagatgacatggacattgaagaaatgttagct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10803 gcaaagaagttatctcaagatgaagaagaagatgacatggacattgaagaaatgttagct 10862
Query: 480 aacttcaagcgggaacaggagaactttgagaagattaatgtcgaaaatgtggataggccc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10863 aacttcaagcgggaacaggagaactttgagaagattaatgtcgaaaatgtggataggccc 10922
Query: 540 gaccaacgtattaatccgtgtatgtttgtgaacccagcccatggtaagcgtgaattaatg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10923 gaccaacgtattaatccgtgtatgtttgtgaacccagcccatggtaagcgtgaattaatg 10982
Query: 600 atgtttggcggggaatctaccacccaagaaacaggtaccacacatttctacaacgattta 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10983 atgtttggcggggaatctaccacccaagaaacaggtaccacacatttctacaacgattta 11042
Query: 660 tttgtatactcattagatacagatacttggaaaaggtatacatctcagaattctccmatg 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 11043 tttgtatactcattagatacagatacttggaaaaggtatacatctcagaattctccaatg 11102
Query: 720 ccaagatcatcagcggcagtwgcatctcatccaacaggtgtagctttaatccatggtggt 779
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 11103 ccaagatcatcagcggcagtagcatctcatccaacaggtgtagctttaatccatggtggt 11162
Query: 780 gagttctcttccccaaagcagaatactttctatcattattctgattcatggctattcgac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11163 gagttctcttccccaaagcagaatactttctatcattattctgattcatggctattcgac 11222
Query: 840 tgctctagcaaagaatggacaaaggttgaacaaaagaatgggcctagtgctaggtcaggt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11223 tgctctagcaaagaatggacaaaggttgaacaaaagaatgggcctagtgctaggtcaggt 11282
Query: 900 catagaatggcaaatttggaaaattttatyatacttcat 938
||||||||||||| || | |||||||||| |||||||||
Sbjct: 11283 catagaatggcaatttggaaaaattttatcatacttcat 11321
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8624
Number of Sequences: 1807
Number of extensions: 8624
Number of successful extensions: 91
Number of sequences better than 1.0e-20: 1
length of query: 938
length of database: 10,358,551
effective HSP length: 16
effective length of query: 922
effective length of database: 10,329,639
effective search space: 9523927158
effective search space used: 9523927158
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)